C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial translation optimization 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034896 Mto1-001 ENSMUSG00000032342 10090 + 9:78448208-78474152 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034896 8.109±0.72 8.989±1.86 6.213±1.17 7.487±0.71 7.717±1.74 4.288±1.58 7.927±0.76 10.621±0.79 8.078±2.18 3.602±1.04 7.772±0.51 6.016±2.51 5.958±2.23 6.810±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002098 IGI tRNA wobble uridine modification
GO:0005739 ISO mitochondrion
GO:0044822 IEA poly(A) RNA binding
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0070899 IGI mitochondrial tRNA wobble uridine modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370300 MTO1-003 protein_coding Homo_sapiens 0 1170
ENST00000370305 MTO1-007 protein_coding Homo_sapiens 0 1020
ENST00000370308 MTO1-002 retained_intron Homo_sapiens 0 1099
ENST00000415228 MTO1-005 nonsense_mediated_decay Homo_sapiens 0 1219
ENST00000415954 MTO1-012 protein_coding Homo_sapiens 0 1321
ENST00000442897 MTO1-014 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000445187 MTO1-006 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000462039 MTO1-004 retained_intron Homo_sapiens 0 822
ENST00000466977 MTO1-009 retained_intron Homo_sapiens 0 448
ENST00000498286 MTO1-001 protein_coding Homo_sapiens 0 2025
ENST00000518210 MTO1-016 processed_transcript Homo_sapiens 0 411
ENST00000521032 MTO1-015 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000521156 MTO1-019 protein_coding Homo_sapiens 0 424
ENST00000522205 MTO1-011 nonsense_mediated_decay Homo_sapiens 0 556

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