C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035719 Ankrd6-001 ENSMUSG00000040183 10090 - 4:32804035-32923455 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLungMuscleOvaryPlacentaENSMUST00000035719
Transcript ID Adipose Breast Kidney Lung Muscle Ovary Placenta
ENSMUST00000035719 0.371±0.00 0.159±0.02 0.125±0.00 0.169±0.00 0.180±0.01 0.477±0.10 0.196±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015O CIL_00015O_0002 CGP 4:32800253-32950841
CIL_00015N CIL_00015N_0002 CGP 4:32804035-33022180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0046330 IBA positive regulation of JNK cascade
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:2000096 IDA positive regulation of Wnt signaling pathway, planar cell polarity pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339746 ANKRD6-002 protein_coding Homo_sapiens 0 2082
ENST00000369408 ANKRD6-001 protein_coding Homo_sapiens 0 996
ENST00000412237 LYRM2-004 nonsense_mediated_decay Homo_sapiens 0.00004 55
ENST00000415924 ANKRD6-012 retained_intron Homo_sapiens 0 1092
ENST00000447838 ANKRD6-005 protein_coding Homo_sapiens 0 2030
ENST00000465722 ANKRD6-003 protein_coding Homo_sapiens 0 704
ENST00000479572 ANKRD6-008 retained_intron Homo_sapiens 0 706
ENST00000485637 ANKRD6-004 protein_coding Homo_sapiens 0 996
ENST00000518150 ANKRD6-016 protein_coding Homo_sapiens 0 534
ENST00000518253 ANKRD6-011 retained_intron Homo_sapiens 0 1762
ENST00000520458 ANKRD6-014 protein_coding Homo_sapiens 0 353
ENST00000520793 ANKRD6-010 protein_coding Homo_sapiens 0 1038
ENST00000520839 ANKRD6-019 retained_intron Homo_sapiens 0 412
ENST00000520886 ANKRD6-013 processed_transcript Homo_sapiens 0 497
ENST00000520897 LYRM2-003 processed_transcript Homo_sapiens 1e-20 104
ENST00000522441 ANKRD6-006 protein_coding Homo_sapiens 0 2082
ENST00000522705 ANKRD6-018 protein_coding Homo_sapiens 0 484
ENST00000522779 ANKRD6-017 protein_coding Homo_sapiens 0 211
ENST00000523377 LYRM2-002 protein_coding Homo_sapiens 6e-27 128
ENST00000523793 LYRM2-001 processed_transcript Homo_sapiens 2e-20 104
ENST00000523798 ANKRD6-015 protein_coding Homo_sapiens 0 420
ENST00000524056 ANKRD6-020 nonsense_mediated_decay Homo_sapiens 0 311

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