C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: l(3)mbt-like (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035751 L3mbtl1-001 ENSMUSG00000035576 10090 + 2:162943474-162974522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035751
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035751 0.010±0.00 0.019±0.01 0.058±0.04 0.032±0.02 0.036±0.01 0.016±0.00 0.019±0.00 0.075±0.00 0.062±0.02 0.061±0.00 0.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044L CIL_00044L_0002 CGP 2:162931528-162974522
CIL_0003UN CIL_0003UN_0002 CGP 2:162943472-163014127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0000793 ISS condensed chromosome
GO:0003682 ISS chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005654 ISS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007088 ISS regulation of mitosis
GO:0008270 IEA zinc ion binding
GO:0016568 ISS chromatin modification
GO:0030097 ISS hemopoiesis
GO:0031491 ISS nucleosome binding
GO:0031493 ISS nucleosomal histone binding
GO:0032093 IEA SAM domain binding
GO:0035064 ISS methylated histone binding
GO:0040029 NAS regulation of gene expression, epigenetic
GO:0042393 IEA histone binding
GO:0042802 IEA identical protein binding
GO:0045652 ISS regulation of megakaryocyte differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373133 L3MBTL1-010 retained_intron Homo_sapiens 0 1336
ENST00000373134 L3MBTL1-003 protein_coding Homo_sapiens 0 2037
ENST00000373135 L3MBTL1-005 protein_coding Homo_sapiens 0 2100
ENST00000418998 L3MBTL1-201 protein_coding Homo_sapiens 0 2100
ENST00000422861 L3MBTL1-011 protein_coding Homo_sapiens 0 2073
ENST00000427442 L3MBTL1-007 protein_coding Homo_sapiens 0 2100
ENST00000445228 L3MBTL1-004 nonsense_mediated_decay Homo_sapiens 0 1009
ENST00000471977 L3MBTL1-002 processed_transcript Homo_sapiens 2e-34 148
ENST00000483547 L3MBTL1-013 retained_intron Homo_sapiens 0 263
ENST00000485334 L3MBTL1-017 retained_intron Homo_sapiens 0 235
ENST00000497347 L3MBTL1-012 retained_intron Homo_sapiens 0 867

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