C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium homeostasis modulator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035822 Calhm2-001 ENSMUSG00000033033 10090 - 19:47131823-47138294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000035822
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000035822 6.454±2.71 5.870±0.45 7.695±0.69 10.009±3.41 6.009±0.64 2.386±0.39 2.309±0.09 1.530±0.00 11.616±2.60 6.826±0.40 2.154±0.00 1.638±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039E CIL_00039E_0003 CGP 19:47083471-47131143
CIL_000661 CIL_000661_0002 CGP 19:47090766-47138294
CIL_000660 CIL_000660_0002 CGP 19:47105353-47144174

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006811 IEA ion transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260743 CALHM2-002 protein_coding Homo_sapiens 0 1144
ENST00000369788 CALHM2-001 protein_coding Homo_sapiens 0 1144
ENST00000463878 CALHM2-007 processed_transcript Homo_sapiens 0 283
ENST00000494180 CALHM2-005 processed_transcript Homo_sapiens 0 403

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