C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-secretase activating protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036031 Gsap-201 ENSMUSG00000039934 10090 + 5:21186267-21291701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036031 1.834±1.26 0.785±0.11 0.952±0.02 2.165±1.96 1.327±0.54 0.665±0.18 0.633±0.18 1.412±0.53 4.342±3.36 15.348±1.36 0.244±0.11 1.820±0.52 0.242±0.05 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000862 CIL_000862_0002 VISTA 5:20650023-21250986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001540 ISS beta-amyloid binding
GO:0005802 ISS trans-Golgi network
GO:0030162 ISS regulation of proteolysis
GO:1902004 IDA positive regulation of beta-amyloid formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257626 GSAP-001 protein_coding Homo_sapiens 0 1882
ENST00000426477 GSAP-012 processed_transcript Homo_sapiens 0 233
ENST00000440473 GSAP-009 processed_transcript Homo_sapiens 0 516
ENST00000441833 GSAP-201 protein_coding Homo_sapiens 0 538
ENST00000449779 GSAP-003 retained_intron Homo_sapiens 0 808
ENST00000474686 GSAP-013 retained_intron Homo_sapiens 0 457
ENST00000482866 GSAP-005 retained_intron Homo_sapiens 8e-19 100
ENST00000491796 GSAP-004 retained_intron Homo_sapiens 0 776

Loading