C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-ray radiation resistance associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036155 Xrra1-201 ENSMUSG00000035211 10090 + 7:99859218-99917824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036155 0.134±0.04 25.104±0.92 0.025±0.00 0.237±0.14 0.156±0.05 0.061±0.01 0.046±0.03 0.103±0.04 0.017±0.01 0.261±0.11 0.163±0.05 0.351±0.10 0.144±0.13 80.911±32.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0010165 ISS response to X-ray

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321448 XRRA1-002 protein_coding Homo_sapiens 0 767
ENST00000340360 XRRA1-001 protein_coding Homo_sapiens 0 1624
ENST00000525407 XRRA1-016 protein_coding Homo_sapiens 0 747
ENST00000526047 XRRA1-017 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000527087 XRRA1-009 protein_coding Homo_sapiens 0 689
ENST00000528219 XRRA1-014 protein_coding Homo_sapiens 0 699
ENST00000528819 XRRA1-006 processed_transcript Homo_sapiens 7.00005e-41 171
ENST00000530562 XRRA1-004 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000531849 XRRA1-003 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000531852 XRRA1-011 protein_coding Homo_sapiens 0 342
ENST00000533598 XRRA1-015 processed_transcript Homo_sapiens 0 464
ENST00000534041 XRRA1-012 processed_transcript Homo_sapiens 3e-25 119

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