C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036176 Arhgap39-002 ENSMUSG00000033697 10090 - 15:76723985-76818083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036176
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036176 2.384±1.20 1.529±0.79 2.357±0.15 2.071±0.00 3.577±1.02 0.468±0.00 1.712±0.63 1.667±0.96 2.879±0.38 0.749±0.14 4.265±0.42 5.825±1.64 3.450±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0002 VISTA 15:76709335-77309403
CIL_0000VV CIL_0000VV_0002 CGP 15:76723985-76871435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113684 arhgap39-201 protein_coding Danio_rerio 0 503
ENST00000276826 ARHGAP39-001 protein_coding Homo_sapiens 0 2235
ENST00000377307 ARHGAP39-002 protein_coding Homo_sapiens 0 3271
ENST00000528810 ARHGAP39-003 processed_transcript Homo_sapiens 0 520

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