C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal peptidase complex subunit 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036274 Spcs2-201 ENSMUSG00000035227 10090 - 7:99837569-99858883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036274 10.139±3.36 8.666±1.10 3.340±0.16 5.908±4.17 9.493±2.57 8.438±1.06 6.563±0.27 11.009±1.31 14.273±6.18 14.899±2.27 9.261±1.57 14.687±8.35 21.222±11.75 18.007±5.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005787 IEA signal peptidase complex
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008233 IEA peptidase activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263672 SPCS2-001 protein_coding Homo_sapiens 0 966
ENST00000436160 SPCS2P4-001 processed_pseudogene Homo_sapiens 0 909
ENST00000526361 SPCS2-003 protein_coding Homo_sapiens 0 407
ENST00000526883 SPCS2-008 protein_coding Homo_sapiens 0 549
ENST00000527225 SPCS2-007 processed_transcript Homo_sapiens 0 303
ENST00000530257 SPCS2-002 protein_coding Homo_sapiens 0 444
ENST00000532972 SPCS2-004 protein_coding Homo_sapiens 0 856
ENST00000561636 SPCS2P1-001 processed_pseudogene Homo_sapiens 0 850
ENST00000603270 RP11-316M21.9-001 processed_pseudogene Homo_sapiens 0 361
ENST00000610881 SPCS2-201 protein_coding Homo_sapiens 0 953

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