C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037181 Mdga2-002 ENSMUSG00000034912 10090 - 12:66469568-67222549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverPlacentaTestisENSMUST00000037181
Transcript ID Brain Colon Liver Placenta Testis
ENSMUST00000037181 1.130±0.00 0.102±0.00 0.009±0.00 0.005±0.00 0.137±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0002 CGP 12:66283379-67222549
CIL_0005Q4 CIL_0005Q4_0002 CGP 12:66469568-69159186

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007389 IMP pattern specification process
GO:0016020 IEA membrane
GO:0021522 IEA spinal cord motor neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357362 MDGA2-002 protein_coding Homo_sapiens 0 4048
ENST00000399232 MDGA2-001 protein_coding Homo_sapiens 0 5049
ENST00000426342 MDGA2-201 protein_coding Homo_sapiens 0 4625
ENST00000482848 MDGA2-006 nonsense_mediated_decay Homo_sapiens 0 1720
ENST00000486952 MDGA2-005 protein_coding Homo_sapiens 0 392
ENST00000554762 MDGA2-007 protein_coding Homo_sapiens 0 961
ENST00000555521 MDGA2-010 retained_intron Homo_sapiens 0 623
ENST00000557238 MDGA2-008 nonsense_mediated_decay Homo_sapiens 0 3101
ENST00000557516 MDGA2-009 retained_intron Homo_sapiens 0 545

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