C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionyl aminopeptidase type 1D (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037210 Metap1d-001 ENSMUSG00000041921 10090 + 2:71453276-71525191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037210
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037210 9.804±0.18 2.902±0.00 12.308±2.88 9.631±3.15 5.086±0.82 2.132±0.76 13.386±1.36 12.390±1.04 11.099±4.72 3.199±0.73 14.625±0.73 8.282±5.53 3.131±1.30 3.907±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K4 CIL_0004K4_0002 CGP 2:71388958-71525194
CIL_0004K6 CIL_0004K6_0002 CGP 2:71453276-71533981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 ISS mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding
GO:0070006 IEA metalloaminopeptidase activity
GO:0070084 IEA protein initiator methionine removal

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315796 METAP1D-001 protein_coding Homo_sapiens 0 1371
ENST00000392582 METAP1D-006 processed_transcript Homo_sapiens 0 542
ENST00000468537 METAP1D-007 processed_transcript Homo_sapiens 0 580
ENST00000488581 METAP1D-005 processed_transcript Homo_sapiens 0 651
ENST00000491440 METAP1D-004 processed_transcript Homo_sapiens 0 213
ENST00000493035 METAP1D-002 processed_transcript Homo_sapiens 0 436
ENST00000493742 METAP1D-003 processed_transcript Homo_sapiens 0 217

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