C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: doublecortin domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037284 Dcdc5-004 ENSMUSG00000074981 10090 + 2:106383687-106406151 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000037284
Transcript ID Brain Ovary
ENSMUST00000037284 0.388±0.03 0.803±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JA CIL_0007JA_0005 UCNEbase 2:105301487-106575818
CIL_0008UP CIL_0008UP_0002 VISTA 2:105418757-106020536
CIL_0007UQ CIL_0007UQ_0002 VISTA 2:105478530-106080039
CIL_0008KI CIL_0008KI_0002 VISTA 2:105533387-106134697
CIL_00096G CIL_00096G_0002 VISTA 2:105613336-106214486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303697 DCDC1-005 nonsense_mediated_decay Homo_sapiens 1.99993e-41 176
ENST00000406071 DCDC1-201 protein_coding Homo_sapiens 0 309
ENST00000444572 DCDC1-008 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000483396 DCDC1-009 retained_intron Homo_sapiens 0 309
ENST00000597505 DCDC1-010 protein_coding Homo_sapiens 0 307

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