C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 13b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037593 Ankrd13b-001 ENSMUSG00000037907 10090 - 11:77470485-77489666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037593 3.146±1.05 1.960±0.81 4.769±0.48 35.165±11.72 2.350±0.97 2.642±0.64 3.017±0.74 2.392±0.46 0.555±0.26 2.372±0.26 3.480±0.74 5.770±1.25 0.222±0.03 0.578±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394859 ANKRD13B-001 protein_coding Homo_sapiens 0 3188
ENST00000487527 ANKRD13B-002 retained_intron Homo_sapiens 0 2507
ENST00000488766 ANKRD13B-004 nonsense_mediated_decay Homo_sapiens 0 2638
ENST00000493506 ANKRD13B-003 retained_intron Homo_sapiens 0 1956
ENST00000579719 ANKRD13B-008 protein_coding Homo_sapiens 0 399
ENST00000614878 ANKRD13B-201 protein_coding Homo_sapiens 0 2638

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