C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037958 Arhgap29-001 ENSMUSG00000039831 10090 + 3:121953229-122016677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037958
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037958 1.313±0.11 1.662±0.21 0.797±0.13 0.942±0.00 1.546±0.00 1.886±0.53 0.570±0.27 4.489±0.05 0.888±0.18 5.465±0.42 3.793±1.13 9.720±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DI CIL_0009DI_0002 VISTA 3:121653542-122254391
CIL_0009DJ CIL_0009DJ_0002 VISTA 3:121747471-122349247
CIL_0005PB CIL_0005PB_0003 CGP 3:121953229-122180061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0030165 ISO PDZ domain binding
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260526 ARHGAP29-001 protein_coding Homo_sapiens 0 3757
ENST00000370217 ARHGAP29-002 protein_coding Homo_sapiens 0 1382
ENST00000482481 ARHGAP29-003 processed_transcript Homo_sapiens 0 1740
ENST00000552844 ARHGAP29-004 nonsense_mediated_decay Homo_sapiens 0 3362

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