C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UV radiation resistance associated gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037968 Uvrag-201 ENSMUSG00000035354 10090 - 7:98886743-99141144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037968
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037968 8.010±0.64 8.459±1.81 9.668±0.79 6.761±0.90 10.902±5.85 7.664±1.16 3.677±0.51 5.870±0.34 5.625±0.91 14.361±2.75 1.941±0.29 10.551±2.29 12.054±2.70 2.155±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000927 CIL_000927_0002 VISTA 7:98656508-99258633
CIL_0001HX CIL_0001HX_0002 CGP 7:98835112-99141144
CIL_0002KJ CIL_0002KJ_0002 CGP 7:98886743-99182713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IDA SNARE binding
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005769 IEA early endosome
GO:0005770 IEA late endosome
GO:0010508 IEA positive regulation of autophagy
GO:0017124 IPI SH3 domain binding
GO:0035493 IMP SNARE complex assembly
GO:0043234 IDA protein complex
GO:0045335 IPI phagocytic vesicle
GO:0046718 IMP viral entry into host cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356136 UVRAG-001 protein_coding Homo_sapiens 0 2248
ENST00000525872 UVRAG-008 processed_transcript Homo_sapiens 0.000000000000001 88
ENST00000528264 UVRAG-007 protein_coding Homo_sapiens 0 503
ENST00000528420 UVRAG-002 protein_coding Homo_sapiens 0 2071
ENST00000530501 UVRAG-009 retained_intron Homo_sapiens 0 270
ENST00000531818 UVRAG-003 protein_coding Homo_sapiens 0 1386
ENST00000532130 UVRAG-004 protein_coding Homo_sapiens 0 1382
ENST00000533454 UVRAG-005 protein_coding Homo_sapiens 0 577

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