C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: propionyl-Coenzyme A carboxylase, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038374 Pcca-001 ENSMUSG00000041650 10090 + 14:122534339-122889944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038374 20.758±2.02 19.746±1.40 6.164±0.65 8.779±2.78 25.185±11.37 11.016±1.52 11.495±6.25 35.986±9.39 21.212±9.73 8.912±1.25 13.561±3.41 13.631±4.09 4.748±2.96 10.151±2.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0002 VISTA 14:121953729-122558284
CIL_0007LI CIL_0007LI_0002 UCNEbase 14:122256414-122883962
CIL_0000WI CIL_0000WI_0002 CGP 14:122534324-122913757

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004075 IEA biotin carboxylase activity
GO:0004658 IMP propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0008152 IEA metabolic process
GO:0019899 IEA enzyme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376250 GGACT-001 protein_coding Homo_sapiens 0 279
ENST00000376279 PCCA-201 protein_coding Homo_sapiens 0 2097
ENST00000376285 PCCA-001 protein_coding Homo_sapiens 0 2591
ENST00000376286 PCCA-202 protein_coding Homo_sapiens 0 2540
ENST00000428969 PCCA-007 protein_coding Homo_sapiens 0 364
ENST00000455100 GGACT-201 protein_coding Homo_sapiens 0 279
ENST00000458283 PCCA-004 protein_coding Homo_sapiens 0 366
ENST00000485946 PCCA-006 processed_transcript Homo_sapiens 0 265

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