C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 60
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039349 Wdr60-201 ENSMUSG00000042050 10090 - 12:116207050-116263025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039349
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039349 1.830±0.34 1.367±0.54 2.954±0.17 6.228±5.26 1.306±0.42 1.029±0.25 0.229±0.09 1.228±0.52 0.923±0.47 2.381±0.41 1.461±0.34 3.242±1.19 6.956±4.46 16.475±6.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZE CIL_0007ZE_0002 VISTA 12:115798480-116400072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0005929 IDA cilium
GO:0008150 ND biological_process
GO:0030030 IEA cell projection organization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000407559 WDR60-001 protein_coding Homo_sapiens 0 1705
ENST00000444851 WDR60-002 nonsense_mediated_decay Homo_sapiens 0 819
ENST00000467220 WDR60-003 retained_intron Homo_sapiens 0 1496

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