C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tubulin, gamma complex associated protein 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000039541  |
Tubgcp4-001 |
ENSMUSG00000027263 |
10090 | + |
2:121171215-121198770  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005YG | CIL_0005YG_0002 | CGP | 2:121140428-121171125 |
| CIL_0005YH | CIL_0005YH_0002 | CGP | 2:121158273-121198770 |
| CIL_0005YA | CIL_0005YA_0002 | CGP | 2:121170654-121271407 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000226 | IEA | microtubule cytoskeleton organization |
| GO:0000922 | IEA | spindle pole |
| GO:0003674 | ND | molecular_function |
| GO:0005737 | IEA | cytoplasm |
| GO:0005813 | IEA | centrosome |
| GO:0005874 | IEA | microtubule |
| GO:0008150 | ND | biological_process |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000260383
|
TUBGCP4-001 | protein_coding | Homo_sapiens | 0 | 2684 |
|
ENST00000263801
|
TP53BP1-002 | protein_coding | Homo_sapiens | 0 | 579 |
|
ENST00000382039
|
TP53BP1-004 | protein_coding | Homo_sapiens | 0 | 569 |
|
ENST00000382044
|
TP53BP1-001 | protein_coding | Homo_sapiens | 0 | 736 |
|
ENST00000411772
|
TP53BP1-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 569 |
|
ENST00000450115
|
TP53BP1-014 | protein_coding | Homo_sapiens | 0 | 566 |
|
ENST00000476454
|
TP53BP1-003 | retained_intron | Homo_sapiens | 0 | 569 |
|
ENST00000561691
|
TUBGCP4-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1559 |
|
ENST00000562053
|
TUBGCP4-009 | retained_intron | Homo_sapiens | 0 | 311 |
|
ENST00000563147
|
TUBGCP4-011 | protein_coding | Homo_sapiens | 0 | 486 |
|
ENST00000563412
|
TUBGCP4-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 372 |
|
ENST00000563517
|
TUBGCP4-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 294 |
|
ENST00000563963
|
TUBGCP4-004 | retained_intron | Homo_sapiens | 0 | 885 |
|
ENST00000564079
|
TUBGCP4-002 | protein_coding | Homo_sapiens | 0 | 2663 |
|
ENST00000564511
|
TUBGCP4-007 | retained_intron | Homo_sapiens | 0 | 438 |
|
ENST00000565548
|
TUBGCP4-012 | protein_coding | Homo_sapiens | 0 | 431 |
|
ENST00000566251
|
TUBGCP4-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 222 |
|
ENST00000570081
|
TUBGCP4-005 | processed_transcript | Homo_sapiens | 0 | 309 |
