C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin, gamma complex associated protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039541 Tubgcp4-001 ENSMUSG00000027263 10090 + 2:121171215-121198770 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YG CIL_0005YG_0002 CGP 2:121140428-121171125
CIL_0005YH CIL_0005YH_0002 CGP 2:121158273-121198770
CIL_0005YA CIL_0005YA_0002 CGP 2:121170654-121271407

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000922 IEA spindle pole
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005874 IEA microtubule
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260383 TUBGCP4-001 protein_coding Homo_sapiens 0 2684
ENST00000263801 TP53BP1-002 protein_coding Homo_sapiens 0 579
ENST00000382039 TP53BP1-004 protein_coding Homo_sapiens 0 569
ENST00000382044 TP53BP1-001 protein_coding Homo_sapiens 0 736
ENST00000411772 TP53BP1-011 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000450115 TP53BP1-014 protein_coding Homo_sapiens 0 566
ENST00000476454 TP53BP1-003 retained_intron Homo_sapiens 0 569
ENST00000561691 TUBGCP4-003 nonsense_mediated_decay Homo_sapiens 0 1559
ENST00000562053 TUBGCP4-009 retained_intron Homo_sapiens 0 311
ENST00000563147 TUBGCP4-011 protein_coding Homo_sapiens 0 486
ENST00000563412 TUBGCP4-008 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000563517 TUBGCP4-006 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000563963 TUBGCP4-004 retained_intron Homo_sapiens 0 885
ENST00000564079 TUBGCP4-002 protein_coding Homo_sapiens 0 2663
ENST00000564511 TUBGCP4-007 retained_intron Homo_sapiens 0 438
ENST00000565548 TUBGCP4-012 protein_coding Homo_sapiens 0 431
ENST00000566251 TUBGCP4-010 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000570081 TUBGCP4-005 processed_transcript Homo_sapiens 0 309

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