C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 41, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039956 Slc41a2-001 ENSMUSG00000034591 10090 - 10:83230848-83337882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039956 0.923±0.23 0.793±0.13 1.130±0.46 0.894±0.28 0.849±0.00 3.208±0.77 0.233±0.00 1.357±0.46 0.058±0.03 1.329±0.17 0.073±0.01 1.746±0.89 1.218±0.86 2.552±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0002 CGP 10:82985498-83337882
CIL_0004GE CIL_0004GE_0002 CGP 10:83230848-83368835

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0008324 IEA cation transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258538 SLC41A2-001 protein_coding Homo_sapiens 0 1895
ENST00000357731 NEGR1-001 protein_coding Homo_sapiens 0.000001 62
ENST00000411411 SLC41A2-009 protein_coding Homo_sapiens 0 291
ENST00000415674 SLC41A2-008 protein_coding Homo_sapiens 0 333
ENST00000417469 SLC41A2-004 protein_coding Homo_sapiens 8.99998e-41 171
ENST00000424946 SLC41A2-007 protein_coding Homo_sapiens 0 237
ENST00000433540 SLC41A2-005 protein_coding Homo_sapiens 0 237
ENST00000437220 SLC41A2-002 protein_coding Homo_sapiens 0 274
ENST00000449866 SLC41A2-003 protein_coding Homo_sapiens 0 265

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