C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lemur tyrosine kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041804 Lmtk2-001 ENSMUSG00000038970 10090 + 5:144100436-144188204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041804 7.238±0.61 9.521±0.81 5.934±0.69 10.115±4.69 6.569±2.13 11.481±2.82 5.730±0.24 13.452±1.39 2.527±0.46 11.362±2.64 4.378±0.77 7.463±1.76 9.118±3.58 4.794±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053D CIL_00053D_0002 CGP 5:144019804-144188204
CIL_00053C CIL_00053C_0002 CGP 5:144100436-144194441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001881 IEA receptor recycling
GO:0004674 ISA protein serine/threonine kinase activity
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 ISA cytoplasm
GO:0005769 IEA early endosome
GO:0005794 IEA Golgi apparatus
GO:0007399 ISA nervous system development
GO:0007411 ISA axon guidance
GO:0016021 IEA integral component of membrane
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0018107 IEA peptidyl-threonine phosphorylation
GO:0032456 IEA endocytic recycling
GO:0033572 IEA transferrin transport
GO:0043086 IEA negative regulation of catalytic activity
GO:0045022 IEA early endosome to late endosome transport
GO:0046777 ISA protein autophosphorylation
GO:0048011 ISA neurotrophin TRK receptor signaling pathway
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055037 IEA recycling endosome
GO:0070853 IEA myosin VI binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297293 LMTK2-001 protein_coding Homo_sapiens 0 1749
ENST00000493372 LMTK2-003 processed_transcript Homo_sapiens 0 396

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