C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042205 Ccdc33-005 ENSMUSG00000037716 10090 - 9:58028677-58102297 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaTestisENSMUST00000042205
Transcript ID Kidney Placenta Testis
ENSMUST00000042205 0.041±0.00 0.643±0.00 32.822±10.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834
CIL_00029J CIL_00029J_0002 CGP 9:58006411-58118823
CIL_00045Q CIL_00045Q_0002 CGP 9:58028677-58153996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005777 IDA peroxisome
GO:0007283 NAS spermatogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268082 CCDC33-002 protein_coding Homo_sapiens 0 453
ENST00000321374 CCDC33-004 nonsense_mediated_decay Homo_sapiens 0 617
ENST00000398814 CCDC33-001 protein_coding Homo_sapiens 0 911
ENST00000558659 CCDC33-003 protein_coding Homo_sapiens 0 678
ENST00000558821 CCDC33-006 protein_coding Homo_sapiens 0 617
ENST00000560565 CCDC33-005 retained_intron Homo_sapiens 0 353

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