C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2300002M23 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044326 2300002M23Rik-001 ENSMUSG00000039269 10090 + 17:35567450-35568952 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLungOvaryPlacentaTestisENSMUST00000044326
Transcript ID Adipose Brain Kidney Lung Ovary Placenta Testis
ENSMUST00000044326 0.025±0.00 0.024±0.00 0.056±0.02 8.833±0.44 7.229±1.69 0.022±0.02 0.980±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IDA fibronectin binding
GO:0005518 IDA collagen binding
GO:0005539 IDA glycosaminoglycan binding
GO:0005540 IDA hyaluronic acid binding
GO:0005614 IDA interstitial matrix
GO:0008201 IDA heparin binding
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0043236 IDA laminin binding
GO:0070052 IDA collagen V binding

Homologs

No Homologs available.

Loading