C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045247 Wdr18-201 ENSMUSG00000035754 10090 + 10:79960152-79969246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045247 11.420±4.81 23.695±7.90 6.160±0.84 10.895±4.37 9.976±2.64 13.400±4.70 8.630±2.88 18.609±4.49 12.009±5.61 8.448±1.46 6.767±0.98 20.986±9.77 8.603±6.69 8.205±5.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0004VT CIL_0004VT_0002 CGP 10:79927043-79969246
CIL_0005ZM CIL_0005ZM_0003 CGP 10:79960152-79977190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251289 WDR18-011 protein_coding Homo_sapiens 0 1166
ENST00000585809 WDR18-001 protein_coding Homo_sapiens 0 1216
ENST00000587001 WDR18-004 protein_coding Homo_sapiens 0 1062
ENST00000590354 WDR18-006 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000591985 WDR18-002 nonsense_mediated_decay Homo_sapiens 0 1160
ENST00000607440 WDR18-008 protein_coding Homo_sapiens 0 850

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