C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045628 R3hdm4-201 ENSMUSG00000035781 10090 - 10:79910053-79916930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045628
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045628 52.144±2.42 59.172±3.97 60.544±0.15 80.652±23.36 59.628±4.99 122.247±20.01 38.576±6.51 52.439±5.40 29.601±5.51 51.875±3.79 48.503±3.68 68.562±26.63 26.622±5.05 5.136±2.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_00011Z CIL_00011Z_0002 CGP 10:79894708-79917006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361574 R3HDM4-001 protein_coding Homo_sapiens 0.00000000003 75
ENST00000587975 R3HDM4-003 protein_coding Homo_sapiens 0.00000000002 75
ENST00000589428 R3HDM4-002 nonsense_mediated_decay Homo_sapiens 0.00000000002 75

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