C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046897 Trim14-001 ENSMUSG00000039853 10090 - 4:46506847-46536141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungOvaryENSMUST00000046897
Transcript ID Adrenal Breast Kidney Liver Lung Ovary
ENSMUST00000046897 4.712±0.97 19.243±2.41 1.625±0.00 4.194±0.00 8.243±0.00 9.510±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029Q CIL_00029Q_0002 CGP 4:46450902-46503632
CIL_00029N CIL_00029N_0002 CGP 4:46489248-46536141
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0032897 IEA negative regulation of viral transcription
GO:0045087 IEA innate immune response
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341469 TRIM14-001 protein_coding Homo_sapiens 0 1125
ENST00000342043 TRIM14-002 protein_coding Homo_sapiens 0 1125
ENST00000375098 TRIM14-004 protein_coding Homo_sapiens 0 1125
ENST00000475147 TRIM14-007 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000478530 TRIM14-006 processed_transcript Homo_sapiens 0 577

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