C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048260 Lman1-001 ENSMUSG00000041891 10090 - 18:65980754-66002637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048260 15.191±4.18 30.440±4.58 11.978±1.48 5.681±1.85 10.803±1.55 14.403±3.15 10.437±2.42 17.803±3.20 43.415±16.52 16.528±4.89 7.954±0.26 24.234±6.39 28.384±7.71 2.329±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H6 CIL_0004H6_0002 CGP 18:65955727-66022580
CIL_0001P5 CIL_0001P5_0002 CGP 18:65980754-66302739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0007029 IMP endoplasmic reticulum organization
GO:0007030 IEA Golgi organization
GO:0010638 IEA positive regulation of organelle organization
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030017 IDA sarcomere
GO:0030134 IDA ER to Golgi transport vesicle
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251047 LMAN1-001 protein_coding Homo_sapiens 0 1600
ENST00000587561 LMAN1-005 retained_intron Homo_sapiens 0 732
ENST00000587940 LMAN1-002 processed_transcript Homo_sapiens 0 298
ENST00000592562 LMAN1-004 retained_intron Homo_sapiens 2.00386e-43 180

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