C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and SOCS box-containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048302 Asb10-001 ENSMUSG00000038204 10090 - 5:24532697-24540457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048302 0.147±0.06 0.125±0.04 0.106±0.06 0.071±0.00 3.562±4.24 0.121±0.05 44.063±5.08 0.225±0.12 0.017±0.00 1.059±0.59 59.629±6.27 0.616±0.41 0.031±0.01 0.159±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0001BI CIL_0001BI_0003 CGP 5:24502757-24540978
CIL_00005V CIL_00005V_0002 CGP 5:24532697-24555469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275838 ASB10-002 protein_coding Homo_sapiens 0 1107
ENST00000377867 ASB10-003 protein_coding Homo_sapiens 0 1051
ENST00000415615 ASB10-004 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000420175 ASB10-001 protein_coding Homo_sapiens 0 1384

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