C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 22B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048677 Tbc1d22b-001 ENSMUSG00000042203 10090 + 17:29549788-29606895 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048677 9.116±0.35 15.672±1.65 10.495±1.15 17.152±2.92 11.402±0.86 13.925±0.71 8.000±0.77 12.531±2.93 4.758±0.00 9.944±1.62 4.952±0.69 12.183±2.47 14.066±6.20 12.921±5.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0005CY CIL_0005CY_0002 CGP 17:29526033-29606895
CIL_0005CZ CIL_0005CZ_0002 CGP 17:29549788-29641664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357219 TMEM217-004 retained_intron Homo_sapiens 0 248
ENST00000373491 TBC1D22B-001 protein_coding Homo_sapiens 0 2193

Loading