C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein O-fucosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049863 Pofut1-001 ENSMUSG00000046020 10090 + 2:153241533-153270247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049863 12.011±3.05 14.349±1.43 12.836±0.91 4.126±1.93 8.434±1.52 11.369±0.76 3.542±0.43 5.099±0.48 4.740±1.48 9.093±1.20 2.196±0.16 10.026±2.38 5.085±1.56 1.916±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0006RY CIL_0006RY_0003 CGP 2:153227759-153270247
CIL_0006RX CIL_0006RX_0003 CGP 2:153241533-153333390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001756 IMP somitogenesis
GO:0005783 IEA endoplasmic reticulum
GO:0006004 TAS fucose metabolic process
GO:0006493 ISS protein O-linked glycosylation
GO:0007219 IMP Notch signaling pathway
GO:0007399 IMP nervous system development
GO:0007507 IMP heart development
GO:0008417 ISS fucosyltransferase activity
GO:0016020 ISS membrane
GO:0036066 IEA protein O-linked fucosylation
GO:0046922 IEA peptide-O-fucosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375730 POFUT1-005 protein_coding Homo_sapiens 0 662
ENST00000375749 POFUT1-004 protein_coding Homo_sapiens 0 1341
ENST00000465791 POFUT1-002 processed_transcript Homo_sapiens 0 525
ENST00000486717 POFUT1-001 processed_transcript Homo_sapiens 0 965

Loading