C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050083 Cul4b-003 ENSMUSG00000031095 10090 - X:38533574-38576183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000050083
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000050083 2.064±0.00 1.449±0.24 1.707±0.19 0.854±0.16 1.960±0.45 1.579±0.41 1.210±0.33 2.017±1.08 29.122±12.57 4.857±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016X CIL_00016X_0003 CGP X:38401357-38576196
CIL_0000GD CIL_0000GD_0003 CGP X:38533274-38613426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007049 IEA cell cycle
GO:0031465 ISS Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0045732 IMP positive regulation of protein catabolic process
GO:1900087 IMP positive regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336592 CUL4B-004 protein_coding Homo_sapiens 0 3879
ENST00000371322 CUL4B-003 protein_coding Homo_sapiens 0 3781
ENST00000371323 CUL4B-007 protein_coding Homo_sapiens 0 952
ENST00000404115 CUL4B-001 protein_coding Homo_sapiens 0 3781
ENST00000467641 CUL4B-005 processed_transcript Homo_sapiens 0 896
ENST00000497616 CUL4B-006 processed_transcript Homo_sapiens 0 802

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