C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UbiA prenyltransferase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051633 Ubiad1-001 ENSMUSG00000047719 10090 - 4:148434495-148444771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051633 4.926±1.13 10.411±2.16 3.356±0.00 3.361±1.57 5.378±2.09 6.804±0.56 4.643±0.68 11.381±3.32 3.640±0.85 5.183±1.76 3.576±0.55 7.819±2.61 6.998±2.61 3.035±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001885 ISS endothelial cell development
GO:0004659 ISS prenyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 ISS endoplasmic reticulum
GO:0006744 ISS ubiquinone biosynthetic process
GO:0009234 ISS menaquinone biosynthetic process
GO:0016020 IEA membrane
GO:0016209 ISS antioxidant activity
GO:0030173 ISS integral component of Golgi membrane
GO:0042371 ISS vitamin K biosynthetic process
GO:0072358 ISS cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376804 UBIAD1-003 protein_coding Homo_sapiens 0 619
ENST00000376810 UBIAD1-001 protein_coding Homo_sapiens 0 1338
ENST00000483738 UBIAD1-002 protein_coding Homo_sapiens 0 322
ENST00000486588 UBIAD1-004 nonsense_mediated_decay Homo_sapiens 0 351

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