C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannan-binding lectin serine peptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052060 Masp2-001 ENSMUSG00000028979 10090 + 4:148602564-148615499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000052060
Transcript ID Liver
ENSMUST00000052060 17.521±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196
CIL_0008JG CIL_0008JG_0002 VISTA 4:148444314-149044861
CIL_0008RU CIL_0008RU_0002 VISTA 4:148508781-149109416
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001855 IEA complement component C4b binding
GO:0001867 IDA complement activation, lectin pathway
GO:0005509 IEA calcium ion binding
GO:0006508 IEA proteolysis
GO:0006958 IEA complement activation, classical pathway
GO:0008233 IEA peptidase activity
GO:0048306 IEA calcium-dependent protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240185 TARDBP-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000400897 MASP2-001 protein_coding Homo_sapiens 0 1860
ENST00000400898 MASP2-002 protein_coding Homo_sapiens 0 460
ENST00000480221 MASP2-003 retained_intron Homo_sapiens 0 405
ENST00000611136 TARDBP-002 nonsense_mediated_decay Homo_sapiens 3e-22 110
ENST00000612542 TARDBP-003 protein_coding Homo_sapiens 2e-22 110
ENST00000614757 TARDBP-001 nonsense_mediated_decay Homo_sapiens 7e-22 110
ENST00000620028 TARDBP-005 processed_transcript Homo_sapiens 3e-22 110
ENST00000622108 TARDBP-004 nonsense_mediated_decay Homo_sapiens 5e-24 115

Loading