C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052885 Tmem259-001 ENSMUSG00000013858 10090 - 10:79977118-79984330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052885 56.061±13.91 108.850±27.56 40.559±3.16 50.343±26.73 63.612±24.00 76.529±3.65 55.531±10.33 74.005±10.16 36.093±5.68 58.461±8.86 25.717±6.79 66.564±30.76 32.789±14.15 55.112±25.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZM CIL_0005ZM_0003 CGP 10:79960152-79977190
CIL_0005ZF CIL_0005ZF_0003 CGP 10:79970715-79984330
CIL_0000I1 CIL_0000I1_0002 CGP 10:79974948-79996062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333175 TMEM259-002 protein_coding Homo_sapiens 0 1288
ENST00000356663 TMEM259-001 protein_coding Homo_sapiens 0 1676
ENST00000586285 TMEM259-014 protein_coding Homo_sapiens 0 582
ENST00000586704 TMEM259-009 retained_intron Homo_sapiens 0 702
ENST00000589055 TMEM259-013 retained_intron Homo_sapiens 0 267
ENST00000592052 TMEM259-011 retained_intron Homo_sapiens 0 239
ENST00000592590 TMEM259-008 protein_coding Homo_sapiens 0 747
ENST00000592618 TMEM259-012 retained_intron Homo_sapiens 0 394
ENST00000593068 TMEM259-003 nonsense_mediated_decay Homo_sapiens 0 824

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