C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053266 Mcm3-001 ENSMUSG00000041859 10090 - 1:20802968-20820312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053266 4.827±2.83 3.489±0.99 2.647±0.22 4.320±2.65 4.258±0.86 4.275±1.66 1.095±0.28 1.366±0.36 22.020±26.04 4.561±0.72 0.992±0.11 11.622±5.57 26.540±25.46 3.749±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0002 VISTA 1:20619958-21222635
CIL_0005N2 CIL_0005N2_0002 CGP 1:20777146-20820312
CIL_0002I8 CIL_0002I8_0003 CGP 1:20802968-20939650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0006270 IEA DNA replication initiation
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0032508 IEA DNA duplex unwinding
GO:0042555 ISS MCM complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018304 mcm3-001 protein_coding Danio_rerio 0 1044
ENST00000229854 MCM3-006 protein_coding Homo_sapiens 0 2811
ENST00000419835 MCM3-201 protein_coding Homo_sapiens 0 2593
ENST00000421471 MCM3-004 protein_coding Homo_sapiens 0 726
ENST00000476448 MCM3-003 processed_transcript Homo_sapiens 0 876
ENST00000596288 MCM3-001 protein_coding Homo_sapiens 0 2811
ENST00000596983 MCM3-005 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000616552 MCM3-202 protein_coding Homo_sapiens 0 2811

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