C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053456 Sept6-002 ENSMUSG00000050379 10090 - X:36913446-36989656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053456
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053456 1.697±0.69 1.185±0.22 1.791±0.71 2.495±0.30 6.271±1.88 1.494±0.27 0.589±0.33 0.631±0.38 0.984±0.80 1.446±0.64 0.145±0.04 1.616±0.57 3.379±1.66 2.731±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U3 CIL_0001U3_0002 CGP X:36887540-36991794
CIL_000177 CIL_000177_0003 CGP X:36911326-37050418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0008021 IDA synaptic vesicle
GO:0031105 IEA septin complex
GO:0043679 IDA axon terminus
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137997 sept6-001 protein_coding Danio_rerio 0 952
ENSDART00000136442 sept6-002 protein_coding Danio_rerio 0 435
ENSDART00000139615 sept6-003 processed_transcript Danio_rerio 0 425
ENST00000343984 SEPT6-001 protein_coding Homo_sapiens 0 2041
ENST00000354228 SEPT6-004 protein_coding Homo_sapiens 0 2039
ENST00000354416 SEPT6-002 protein_coding Homo_sapiens 0 2043
ENST00000360156 SEPT6-006 protein_coding Homo_sapiens 0 2119
ENST00000394610 SEPT6-201 protein_coding Homo_sapiens 0 2265
ENST00000460411 SEPT6-005 nonsense_mediated_decay Homo_sapiens 0 1345
ENST00000467310 SEPT6-007 processed_transcript Homo_sapiens 0 486
ENST00000481072 SEPT6-008 processed_transcript Homo_sapiens 0 424
ENST00000489216 SEPT6-003 protein_coding Homo_sapiens 0 2119

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