C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5424
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053865 Gm5424-201 ENSMUSG00000046687 10090 + 10:62071015-62072609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053865 0.233±0.07 0.154±0.05 0.655±0.21 0.082±0.02 0.354±0.12 0.490±0.19 0.160±0.12 35.563±1.08 42.437±38.58 0.272±0.01 0.058±0.02 1.069±0.66 1.308±1.76 0.569±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TI CIL_0007TI_0002 VISTA 10:61828052-62430842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000352480 ASS1-002 protein_coding Homo_sapiens 0 1661
ENST00000372386 ASS1-001 processed_transcript Homo_sapiens 0 656
ENST00000372393 ASS1-003 protein_coding Homo_sapiens 0 1663
ENST00000372394 ASS1-004 protein_coding Homo_sapiens 0 1661
ENST00000402854 ASS1P1-001 processed_pseudogene Homo_sapiens 0 1223
ENST00000418694 RP11-336N8.2-001 processed_pseudogene Homo_sapiens 0 1134
ENST00000421118 ASS1P6-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000422569 ASS1-005 protein_coding Homo_sapiens 0 784
ENST00000423174 ASS1P7-001 processed_pseudogene Homo_sapiens 0 1144
ENST00000435496 ASS1P5-001 processed_pseudogene Homo_sapiens 0 1214
ENST00000439462 ASS1P4-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000439895 ASS1P2-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000441309 ASS1P11-001 processed_pseudogene Homo_sapiens 0 1144
ENST00000443588 ASS1-010 protein_coding Homo_sapiens 0 496
ENST00000452496 ASS1P12-001 processed_pseudogene Homo_sapiens 0 1264
ENST00000467695 ASS1-009 retained_intron Homo_sapiens 0 555
ENST00000470849 ASS1-008 retained_intron Homo_sapiens 0 414
ENST00000492400 ASS1-007 processed_transcript Homo_sapiens 0 414
ENST00000493984 ASS1-006 retained_intron Homo_sapiens 0 255
ENST00000507235 ASS1P10-001 processed_pseudogene Homo_sapiens 0 1182
ENST00000513426 ASS1P9-001 processed_pseudogene Homo_sapiens 0 1266
ENST00000526512 RP11-382M14.1-001 processed_pseudogene Homo_sapiens 0 1203
ENST00000553060 RP11-267D19.2-001 processed_pseudogene Homo_sapiens 0 1284

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