C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin Y
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053917 Ccny-201 ENSMUSG00000024286 10090 - 18:9314044-9450150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053917
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053917 15.882±1.91 41.166±25.56 10.117±0.11 11.818±3.68 28.865±13.26 23.584±12.74 13.551±0.96 13.529±2.55 11.075±4.24 14.481±1.19 12.972±1.21 29.541±16.32 16.048±7.62 9.050±3.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q1 CIL_0008Q1_0002 VISTA 18:8727134-9328620
CIL_0008CR CIL_0008CR_0002 VISTA 18:8846715-9448876
CIL_0008Q5 CIL_0008Q5_0002 VISTA 18:8915948-9517732

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 ISS G2/M transition of mitotic cell cycle
GO:0000308 ISS cytoplasmic cyclin-dependent protein kinase holoenzyme complex
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005886 ISS plasma membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016538 ISS cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019901 IEA protein kinase binding
GO:0045737 ISS positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0051301 IEA cell division
GO:0060828 ISS regulation of canonical Wnt signaling pathway
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265375 CCNY-201 protein_coding Homo_sapiens 0 1236
ENST00000339497 CCNY-202 protein_coding Homo_sapiens 0 1129
ENST00000374704 CCNY-002 protein_coding Homo_sapiens 0 1450
ENST00000374706 CCNY-001 protein_coding Homo_sapiens 0 1238
ENST00000465416 CCNY-005 processed_transcript Homo_sapiens 0 571
ENST00000470025 CCNY-008 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000490012 CCNY-004 protein_coding Homo_sapiens 0 243
ENST00000492478 CCNY-003 processed_transcript Homo_sapiens 0 857
ENST00000493157 CCNY-007 protein_coding Homo_sapiens 0 444
ENST00000497692 CCNY-006 processed_transcript Homo_sapiens 0 518

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