C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053959 Ints6-201 ENSMUSG00000035161 10090 - 14:62676330-62761112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053959 2.195±0.03 7.102±5.58 1.742±0.00 1.012±0.55 2.629±1.95 2.273±1.17 0.633±0.32 2.665±1.29 3.006±1.20 0.251±0.03 2.103±0.91 8.567±1.63 11.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GW CIL_0005GW_0002 CGP 14:62555737-62692243
CIL_0002DO CIL_0002DO_0002 CGP 14:62663667-62761112
CIL_0002J2 CIL_0002J2_0002 CGP 14:62676330-62956886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0015629 IEA actin cytoskeleton
GO:0016180 ISS snRNA processing
GO:0032039 ISS integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311234 INTS6-001 protein_coding Homo_sapiens 0 4265
ENST00000398119 INTS6-007 protein_coding Homo_sapiens 0 3808
ENST00000442263 INTS6-003 protein_coding Homo_sapiens 0 1046
ENST00000460868 INTS6-005 processed_transcript Homo_sapiens 0 566
ENST00000461515 INTS6-002 processed_transcript Homo_sapiens 0 536
ENST00000469430 INTS6-010 nonsense_mediated_decay Homo_sapiens 0 3120
ENST00000476666 INTS6-021 processed_transcript Homo_sapiens 0 689
ENST00000483288 INTS6-013 protein_coding Homo_sapiens 0 676
ENST00000483441 INTS6-008 retained_intron Homo_sapiens 0 2401
ENST00000483746 INTS6-020 protein_coding Homo_sapiens 0 608
ENST00000485178 INTS6-014 protein_coding Homo_sapiens 0 695
ENST00000486195 INTS6-015 processed_transcript Homo_sapiens 0 534
ENST00000488009 INTS6-016 protein_coding Homo_sapiens 0 392
ENST00000490542 INTS6-006 protein_coding Homo_sapiens 0 2359
ENST00000491189 INTS6-018 protein_coding Homo_sapiens 0 667
ENST00000491723 INTS6-009 processed_transcript Homo_sapiens 0 865
ENST00000491997 INTS6-017 processed_transcript Homo_sapiens 0 390
ENST00000493153 INTS6-019 retained_intron Homo_sapiens 0 418
ENST00000497989 INTS6-011 protein_coding Homo_sapiens 0 3120
ENST00000504674 INTS6P1-001 processed_pseudogene Homo_sapiens 0 3166

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