C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding protein with multiple splicing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055844 Rbpms2-201 ENSMUSG00000032387 10090 + 9:65630582-65660505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055844 25.139±9.62 55.814±9.82 60.481±4.75 1.577±0.53 24.427±3.21 22.010±3.98 30.124±6.53 92.456±8.69 26.702±17.18 6.443±0.44 0.596±0.19 35.152±11.12 7.877±7.46 3.662±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657
CIL_0008H0 CIL_0008H0_0002 VISTA 9:65525988-66127110
CIL_0003WW CIL_0003WW_0002 CGP 9:65629648-65690300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300069 RBPMS2-001 protein_coding Homo_sapiens 0 758
ENST00000437762 RBPMS2P1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000560606 RBPMS2-005 protein_coding Homo_sapiens 0 719

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