C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon stimulated exonuclease gene 20-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055984 Isg20l2-001 ENSMUSG00000048039 10090 + 3:87930314-87940686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055984
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055984 15.059±5.30 11.601±1.03 19.159±0.85 16.203±7.16 13.597±2.08 12.770±1.32 5.118±0.23 9.752±0.86 12.884±7.84 16.865±6.25 3.753±0.39 20.855±5.70 20.501±4.92 53.041±10.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004527 IEA exonuclease activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0042254 IEA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303343 SLC50A1-003 protein_coding Homo_sapiens 0.000002 58
ENST00000360954 HS3ST3B1-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000368401 SLC50A1-002 protein_coding Homo_sapiens 0.000002 58
ENST00000368404 SLC50A1-001 protein_coding Homo_sapiens 0.000002 58
ENST00000368405 SLC50A1-008 processed_transcript Homo_sapiens 0.000001 58
ENST00000377978 COX7A2-007 protein_coding Homo_sapiens 0.000006 55
ENST00000536944 RP11-667M19.9-001 processed_pseudogene Homo_sapiens 0 298
ENST00000569333 KCTD19-003 retained_intron Homo_sapiens 0.00002 57
ENST00000622581 SLC50A1-201 protein_coding Homo_sapiens 0.000002 58

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