C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor C domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056344 Vwc2-201 ENSMUSG00000050830 10090 + 11:11115851-11266638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056344 0.180±0.06 0.376±0.27 1.617±0.00 3.653±1.39 0.072±0.05 0.135±0.09 0.544±0.06 0.033±0.01 0.045±0.05 0.179±0.05 0.081±0.05 0.351±0.13 0.125±0.03 0.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S3 CIL_0000S3_0002 CGP 11:9191942-11268931
CIL_0006LI CIL_0006LI_0002 CGP 11:11114223-11462408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005604 IDA basement membrane
GO:0005614 IDA interstitial matrix
GO:0005615 IDA extracellular space
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030054 IEA cell junction
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0031012 IDA extracellular matrix
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse
GO:0045666 IDA positive regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340652 VWC2-001 protein_coding Homo_sapiens 0 1491

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