C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligodendrocyte transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056882 Olig1-001 ENSMUSG00000046160 10090 + 16:91269772-91271933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000056882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000056882 0.450±0.15 0.429±0.29 0.112±0.01 19.144±0.34 0.266±0.13 0.027±0.01 0.089±0.03 0.084±0.04 0.409±0.39 0.072±0.03 0.167±0.07 0.058±0.04 1.381±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0007LZ CIL_0007LZ_0006 UCNEbase 16:91140494-91293136
CIL_0001C5 CIL_0001C5_0002 CGP 16:91225550-91271933
CIL_0007HU CIL_0007HU_0002 CGP 16:91269772-91405589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 ISS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0048663 IMP neuron fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382348 OLIG1-001 protein_coding Homo_sapiens 0 846

Loading