C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9803
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057649 Gm9803-201 ENSMUSG00000045886 10090 + 10:43524102-43524617 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057649
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057649 12.316±6.94 4.725±1.08 2.287±0.72 6.068±2.58 14.144±7.08 4.266±2.14 6.210±1.22 5.372±3.52 3.383±2.12 5.435±1.51 0.665±0.37 10.722±7.50 0.888±0.11 27.503±4.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085F CIL_00085F_0002 VISTA 10:43422435-44024831
CIL_0008PN CIL_0008PN_0002 VISTA 10:43446138-44046678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005744 IEA mitochondrial inner membrane presequence translocase complex
GO:0030150 IEA protein import into mitochondrial matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318059 PAM16-001 protein_coding Homo_sapiens 0 514
ENST00000571819 PAM16-008 processed_transcript Homo_sapiens 3e-28 128
ENST00000571941 PAM16-012 protein_coding Homo_sapiens 0 499
ENST00000571986 PAM16-010 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000572467 CORO7-PAM16-001 protein_coding Homo_sapiens 0 501
ENST00000573236 PAM16-016 retained_intron Homo_sapiens 0 501
ENST00000573553 PAM16-015 protein_coding Homo_sapiens 0 499
ENST00000573614 PAM16-013 processed_transcript Homo_sapiens 2e-32 143
ENST00000575334 CORO7-PAM16-002 nonsense_mediated_decay Homo_sapiens 1e-26 126
ENST00000575636 PAM16-006 nonsense_mediated_decay Homo_sapiens 6e-29 132
ENST00000575848 PAM16-014 protein_coding Homo_sapiens 0 505
ENST00000576217 PAM16-002 protein_coding Homo_sapiens 0 514
ENST00000577031 PAM16-005 protein_coding Homo_sapiens 0 392
ENST00000616009 CORO7-PAM16-202 protein_coding Homo_sapiens 0 514
ENST00000617295 CORO7-PAM16-204 protein_coding Homo_sapiens 0 501

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