C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057843 Commd1-001 ENSMUSG00000051355 10090 - 11:22899764-22978996 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BY CIL_0003BY_0002 CGP 11:22834744-22982090
CIL_0004OO CIL_0004OO_0002 CGP 11:22834747-22982382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006878 ISA cellular copper ion homeostasis
GO:0032088 ISO negative regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307771 ZRSR2-001 protein_coding Homo_sapiens 0 243
ENST00000311832 COMMD1-001 protein_coding Homo_sapiens 0 492
ENST00000315599 CD209-001 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000391338 ZRSR1-001 protein_coding Homo_sapiens 0 244
ENST00000445644 COMMD1-004 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000455659 COMMD1-003 nonsense_mediated_decay Homo_sapiens 1.4013e-45 185
ENST00000471704 COMMD1-007 retained_intron Homo_sapiens 0 353
ENST00000472729 COMMD1-002 processed_transcript Homo_sapiens 0 494
ENST00000497856 REEP5-002 retained_intron Homo_sapiens 2e-36 158
ENST00000506997 CTC-487M23.8-001 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000511865 REEP5-006 nonsense_mediated_decay Homo_sapiens 2e-36 158
ENST00000512790 CTC-487M23.8-004 processed_transcript Homo_sapiens 0 244

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