C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylthioadenosine phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058030 Mtap-001 ENSMUSG00000062937 10090 + 4:89137122-89181081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058030 7.352±0.25 4.101±0.56 14.069±0.42 3.537±1.05 4.642±1.36 1.234±0.21 4.464±0.52 6.314±0.57 5.899±2.59 2.890±0.19 4.214±0.42 7.984±3.06 7.267±3.86 1.060±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074E CIL_00074E_0002 CGP 4:88879538-89181081
CIL_0007YE CIL_0007YE_0002 VISTA 4:89088208-89693783
CIL_0007U7 CIL_0007U7_0002 VISTA 4:89092538-89696083
CIL_0007YH CIL_0007YH_0002 VISTA 4:89093251-89700067
CIL_0007YG CIL_0007YG_0002 VISTA 4:89099831-89706701
CIL_0007U8 CIL_0007U8_0002 VISTA 4:89105459-89706480
CIL_00095D CIL_00095D_0002 VISTA 4:89105812-89710925
CIL_000945 CIL_000945_0002 VISTA 4:89116711-89721138
CIL_0008WE CIL_0008WE_0002 VISTA 4:89121046-89725353
CIL_0007YC CIL_0007YC_0002 VISTA 4:89125337-89732294
CIL_0008P9 CIL_0008P9_0002 VISTA 4:89126411-89729104
CIL_00099P CIL_00099P_0002 VISTA 4:89127311-89729167
CIL_00099O CIL_00099O_0002 VISTA 4:89131159-89734211
CIL_0008TL CIL_0008TL_0002 VISTA 4:89131716-89739478

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004645 IEA phosphorylase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006166 IEA purine ribonucleoside salvage
GO:0017061 IEA S-methyl-5-thioadenosine phosphorylase activity
GO:0019509 IEA L-methionine biosynthetic process from methylthioadenosine
GO:0032259 IMP methylation
GO:0033574 IEA response to testosterone
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380172 MTAP-001 protein_coding Homo_sapiens 0 1038
ENST00000404796 RP11-145E5.5-001 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000419385 MTAP-006 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000427788 MTAP-013 processed_transcript Homo_sapiens 0 420
ENST00000437063 MTAPP2-001 processed_pseudogene Homo_sapiens 0 765
ENST00000460874 MTAP-003 protein_coding Homo_sapiens 0 1003
ENST00000580675 MTAP-011 retained_intron Homo_sapiens 1.00053e-42 176
ENST00000580718 MTAP-007 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000580900 MTAP-008 protein_coding Homo_sapiens 0 959

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