C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058033 Acap2-201 ENSMUSG00000049076 10090 - 16:31092413-31201238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058033
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058033 8.284±3.85 13.958±1.99 15.583±3.67 5.219±0.94 11.529±3.24 15.533±4.62 2.850±0.54 4.784±1.35 3.825±0.42 21.033±2.62 1.456±0.44 15.653±5.35 4.631±1.08 1.615±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CC CIL_0006CC_0002 CGP 16:30955627-31201238
CIL_0003O6 CIL_0003O6_0003 CGP 16:31092413-31275277

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0010008 ISS endosome membrane
GO:0016020 IEA membrane
GO:0017137 IPI Rab GTPase binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0036010 ISS protein localization to endosome
GO:0043547 IEA positive regulation of GTPase activity
GO:1990090 ISS cellular response to nerve growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326793 ACAP2-001 protein_coding Homo_sapiens 0 2966
ENST00000423531 ACAP2-006 protein_coding Homo_sapiens 0 361
ENST00000439666 ACAP2-005 protein_coding Homo_sapiens 0 259
ENST00000439758 ACAP2-007 protein_coding Homo_sapiens 0 821
ENST00000447662 ACAP2-004 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000450200 ACAP2-010 protein_coding Homo_sapiens 0 335
ENST00000466876 ACAP2-011 retained_intron Homo_sapiens 0 281
ENST00000472860 ACAP2-012 processed_transcript Homo_sapiens 0 254
ENST00000475905 ACAP2-009 retained_intron Homo_sapiens 0 523
ENST00000480906 ACAP2-002 retained_intron Homo_sapiens 0 778
ENST00000481463 ACAP2-013 processed_transcript Homo_sapiens 0 326
ENST00000484296 ACAP2-014 retained_intron Homo_sapiens 0 597
ENST00000490224 ACAP2-003 retained_intron Homo_sapiens 3e-31 139
ENST00000618471 ACAP2-201 protein_coding Homo_sapiens 0 2830

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