C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD24a antigen
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058714 Cd24a-201 ENSMUSG00000047139 10090 + 10:43579169-43584262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058714 117.841±112.66 19.534±4.73 53.157±0.29 276.128±205.66 183.460±53.24 381.759±80.92 12.057±8.71 119.593±14.74 435.176±484.42 210.845±23.56 96.634±8.62 121.526±49.01 13.680±8.06 5.575±3.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085F CIL_00085F_0002 VISTA 10:43422435-44024831
CIL_0008PN CIL_0008PN_0002 VISTA 10:43446138-44046678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 ISS response to hypoxia
GO:0001775 ISS cell activation
GO:0001959 IMP regulation of cytokine-mediated signaling pathway
GO:0002237 IDA response to molecule of bacterial origin
GO:0002329 IMP pre-B cell differentiation
GO:0002523 IMP leukocyte migration involved in inflammatory response
GO:0002842 IDA positive regulation of T cell mediated immune response to tumor cell
GO:0002863 IMP positive regulation of inflammatory response to antigenic stimulus
GO:0002904 IDA positive regulation of B cell apoptotic process
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006955 IEA immune response
GO:0007157 IDA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IDA leukocyte cell-cell adhesion
GO:0007166 IDA cell surface receptor signaling pathway
GO:0007204 ISS positive regulation of cytosolic calcium ion concentration
GO:0007274 IGI neuromuscular synaptic transmission
GO:0007406 IMP negative regulation of neuroblast proliferation
GO:0008637 IDA apoptotic mitochondrial changes
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0010976 IDA positive regulation of neuron projection development
GO:0016020 ISS membrane
GO:0016477 IMP cell migration
GO:0019901 ISS protein kinase binding
GO:0022407 IDA regulation of cell-cell adhesion
GO:0022409 IDA positive regulation of cell-cell adhesion
GO:0030246 IDA carbohydrate binding
GO:0030262 IDA apoptotic nuclear changes
GO:0030296 ISS protein tyrosine kinase activator activity
GO:0030889 IDA negative regulation of B cell proliferation
GO:0031175 IDA neuron projection development
GO:0031295 ISS T cell costimulation
GO:0031362 IDA anchored component of external side of plasma membrane
GO:0031528 IDA microvillus membrane
GO:0032597 ISS B cell receptor transport into membrane raft
GO:0032600 IMP chemokine receptor transport out of membrane raft
GO:0032913 ISS negative regulation of transforming growth factor beta3 production
GO:0033625 IDA positive regulation of integrin activation
GO:0033630 IDA positive regulation of cell adhesion mediated by integrin
GO:0033632 IDA regulation of cell-cell adhesion mediated by integrin
GO:0033634 IDA positive regulation of cell-cell adhesion mediated by integrin
GO:0034107 IMP negative regulation of erythrocyte clearance
GO:0034109 IMP homotypic cell-cell adhesion
GO:0034119 IMP negative regulation of erythrocyte aggregation
GO:0042103 IMP positive regulation of T cell homeostatic proliferation
GO:0042104 ISS positive regulation of activated T cell proliferation
GO:0042325 ISS regulation of phosphorylation
GO:0042632 IMP cholesterol homeostasis
GO:0043406 ISS positive regulation of MAP kinase activity
GO:0043408 ISS regulation of MAPK cascade
GO:0043627 ISS response to estrogen
GO:0045121 ISS membrane raft
GO:0045577 IMP regulation of B cell differentiation
GO:0045665 IMP negative regulation of neuron differentiation
GO:0045730 ISS respiratory burst
GO:0046014 IMP negative regulation of T cell homeostatic proliferation
GO:0046641 IDA positive regulation of alpha-beta T cell proliferation
GO:0048488 IMP synaptic vesicle endocytosis
GO:0050731 IDA positive regulation of peptidyl-tyrosine phosphorylation
GO:0050768 IMP negative regulation of neurogenesis
GO:0050850 IDA positive regulation of calcium-mediated signaling
GO:0060170 IDA ciliary membrane
GO:0061098 ISS positive regulation of protein tyrosine kinase activity
GO:0072112 ISS glomerular visceral epithelial cell differentiation
GO:0072139 ISS glomerular parietal epithelial cell differentiation
GO:0097190 IDA apoptotic signaling pathway
GO:2000768 ISS positive regulation of nephron tubule epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382840 CD24P4-001 processed_pseudogene Homo_sapiens 2e-24 115
ENST00000565486 CD24P2-001 processed_pseudogene Homo_sapiens 1e-26 122
ENST00000606017 CD24-201 protein_coding Homo_sapiens 0 388
ENST00000610952 CD24-002 protein_coding Homo_sapiens 0 244
ENST00000619133 CD24-001 protein_coding Homo_sapiens 0 388

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