C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisomal biogenesis factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059021 Pex2-201 ENSMUSG00000040374 10090 - 3:5560188-5576239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059021 4.896±1.21 17.507±1.97 3.695±0.35 4.299±1.40 6.641±3.06 8.899±3.59 5.142±0.46 6.930±3.22 5.513±2.09 8.014±0.98 3.193±0.00 7.415±2.77 3.844±2.87 1.395±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P3 CIL_0007P3_0004 UCNEbase 3:3760514-6887688
CIL_0008IW CIL_0008IW_0002 VISTA 3:5029674-5630756
CIL_0008U7 CIL_0008U7_0002 VISTA 3:5087050-5689713
CIL_0002OE CIL_0002OE_0002 CGP 3:5218526-5576239
CIL_0008QU CIL_0008QU_0002 VISTA 3:5454492-6056119

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0006699 IMP bile acid biosynthetic process
GO:0007399 IMP nervous system development
GO:0008270 IEA zinc ion binding
GO:0042632 IMP cholesterol homeostasis
GO:0045540 IMP regulation of cholesterol biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357039 PEX2-001 protein_coding Homo_sapiens 0 1122
ENST00000518986 PEX2-006 protein_coding Homo_sapiens 0 595
ENST00000520103 PEX2-003 protein_coding Homo_sapiens 0 1110
ENST00000522527 PEX2-002 protein_coding Homo_sapiens 0 1110

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