C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporters), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059056 Slc12a8-201 ENSMUSG00000035506 10090 + 16:33518329-33664135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungENSMUST00000059056
Transcript ID Bladder Brain Colon Kidney Liver Lung
ENSMUST00000059056 0.537±0.06 0.066±0.00 10.569±4.17 0.159±0.09 0.038±0.02 0.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UH CIL_0004UH_0002 CGP 16:33380775-33664135
CIL_0004RM CIL_0004RM_0002 CGP 16:33517328-33771576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006813 IEA potassium ion transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393469 SLC12A8-001 protein_coding Homo_sapiens 0 1853
ENST00000430155 SLC12A8-003 protein_coding Homo_sapiens 0 1013
ENST00000462437 SLC12A8-015 protein_coding Homo_sapiens 0 483
ENST00000465475 SLC12A8-006 processed_transcript Homo_sapiens 0 643
ENST00000465777 SLC12A8-011 processed_transcript Homo_sapiens 0 490
ENST00000469902 SLC12A8-004 protein_coding Homo_sapiens 0 1853
ENST00000473262 SLC12A8-005 nonsense_mediated_decay Homo_sapiens 0 1646
ENST00000479231 SLC12A8-008 retained_intron Homo_sapiens 0 339
ENST00000479352 SLC12A8-002 processed_transcript Homo_sapiens 0 1009
ENST00000479826 SLC12A8-014 protein_coding Homo_sapiens 0 313
ENST00000485849 SLC12A8-012 processed_transcript Homo_sapiens 0 219
ENST00000485954 SLC12A8-009 retained_intron Homo_sapiens 0 446
ENST00000495105 SLC12A8-013 processed_transcript Homo_sapiens 0 521

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