C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060474 Sept6-003 ENSMUSG00000050379 10090 - X:36911326-36989656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000060474
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000060474 0.577±0.03 0.860±0.00 11.995±0.33 0.564±0.00 0.305±0.03 0.269±0.01 0.356±0.00 0.560±0.00 0.107±0.03 0.711±0.27 1.661±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U3 CIL_0001U3_0002 CGP X:36887540-36991794
CIL_000177 CIL_000177_0003 CGP X:36911326-37050418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0008021 IDA synaptic vesicle
GO:0031105 IEA septin complex
GO:0043679 IDA axon terminus
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137997 sept6-001 protein_coding Danio_rerio 0 939
ENSDART00000139615 sept6-003 processed_transcript Danio_rerio 0 422
ENSDART00000136442 sept6-002 protein_coding Danio_rerio 0 422
ENST00000343984 SEPT6-001 protein_coding Homo_sapiens 0 2039
ENST00000354228 SEPT6-004 protein_coding Homo_sapiens 0 2085
ENST00000354416 SEPT6-002 protein_coding Homo_sapiens 0 2041
ENST00000360156 SEPT6-006 protein_coding Homo_sapiens 0 2039
ENST00000394610 SEPT6-201 protein_coding Homo_sapiens 0 2039
ENST00000460411 SEPT6-005 nonsense_mediated_decay Homo_sapiens 0 1345
ENST00000467310 SEPT6-007 processed_transcript Homo_sapiens 0 339
ENST00000481072 SEPT6-008 processed_transcript Homo_sapiens 0 422
ENST00000489216 SEPT6-003 protein_coding Homo_sapiens 0 2039

Loading