C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: enhancer of yellow 2 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060652 Eny2-201 ENSMUSG00000022338 10090 + 15:44428111-44437685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060652 4.287±1.39 2.330±0.26 9.449±0.45 20.960±7.17 2.912±0.77 3.163±1.07 4.056±0.46 7.580±1.49 8.074±3.60 5.545±0.74 6.013±0.73 5.780±4.13 11.614±2.47 2.555±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TA CIL_0004TA_0003 CGP 15:44196135-44428307
CIL_00060B CIL_00060B_0002 CGP 15:44375227-44437685
CIL_00060A CIL_00060A_0002 CGP 15:44428111-44597143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000124 ISS SAGA complex
GO:0003713 ISS transcription coactivator activity
GO:0005643 IEA nuclear pore
GO:0006368 IEA transcription elongation from RNA polymerase II promoter
GO:0006406 IEA mRNA export from nucleus
GO:0015031 IEA protein transport
GO:0016578 IEA histone deubiquitination
GO:0030374 ISS ligand-dependent nuclear receptor transcription coactivator activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0070390 IEA transcription export complex 2
GO:0071819 IEA DUBm complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239690 NUDCD1-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000339942 ENY2-009 nonsense_mediated_decay Homo_sapiens 0 754
ENST00000454534 RP1-180M12.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000456388 AC108059.1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000517311 ENY2-002 nonsense_mediated_decay Homo_sapiens 0 846
ENST00000517350 ENY2-004 retained_intron Homo_sapiens 0 647
ENST00000517756 ENY2-016 processed_transcript Homo_sapiens 0 387
ENST00000518118 ENY2-006 retained_intron Homo_sapiens 0 846
ENST00000518584 ENY2-014 retained_intron Homo_sapiens 0 560
ENST00000519754 ENY2-013 retained_intron Homo_sapiens 0 252
ENST00000520147 ENY2-012 protein_coding Homo_sapiens 0 412
ENST00000521619 ENY2-005 retained_intron Homo_sapiens 0 632
ENST00000521662 ENY2-003 protein_coding Homo_sapiens 0 773
ENST00000521688 ENY2-001 protein_coding Homo_sapiens 0 1325
ENST00000522407 ENY2-010 processed_transcript Homo_sapiens 0 640
ENST00000522632 ENY2-011 retained_intron Homo_sapiens 0 364
ENST00000522766 ENY2-007 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000523335 ENY2-008 nonsense_mediated_decay Homo_sapiens 0 1297
ENST00000523707 ENY2-015 retained_intron Homo_sapiens 0 534

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